Signature	SharedGeneNum	SharedGenes	AvgPval	BreastC_M10 Chr22q11-13_UniqueNum	BreastC_M10 Chr22q11-13_pVal	BreastC_M10 Chr22q11-13_Unique	BreastC_M10 Chr22q11-13_UniqueNum	BreastC_M10 Chr22q11-13_pVal	BreastC_M10 Chr22q11-13_Unique
ACAWNRNSRCGG_UNKNOWN	5	BCL2L13|CRKL|EP300|MTMR3|SREBF2	0.000713737584337	0	0.000713737584337		0	0.000713737584337	
AGUIRRE_PANCREATIC_CANCER_COPY_NUMBER_DN	25	ASCC2|ATF4|BCR|CBY1|DEPDC5|GCAT|GTPBP1|HPS4|JOSD1|MIEF1|MPST|PDGFB|POLR2F|SF3A1|SGSM3|SMARCB1|SNRPD3|SUN2|TAB1|TFIP11|THOC5|TOM1|TOMM22|TST|TXN2	3.47814138639e-17	0	3.47814138639e-17		0	3.47814138639e-17	
FIRESTEIN_PROLIFERATION	8	AAK1|EP300|LIMK2|PACSIN2|PICK1|PKM|XRCC6|XYLB	0.000681424994515	0	0.000681424994515		0	0.000681424994515	
GCCATNTTG_YY1_Q6	13	ATF4|BCL2L13|CLPB|CRKL|DGCR2|EP300|HIC2|HMGXB4|L3MBTL2|MTMR3|PICK1|SF3A1|TUG1	0.00082969302823	0	0.00082969302823		0	0.00082969302823	
GINESTIER_BREAST_CANCER_ZNF217_AMPLIFIED_DN	16	APBA1|BRD1|DEPDC5|GRAMD4|HIRA|L3MBTL2|LIMK2|MAPK11|MICALL1|PHF5A|PICK1|POLR2F|RANGAP1|SGSM3|TRABD|TRMU	8.31555599444e-07	0	8.31555599444e-07		0	8.31555599444e-07	
GSE369_PRE_VS_POST_IL6_INJECTION_SOCS3_KO_LIVER_DN	11	ARSA|ASCC2|GRAMD4|HIRA|LZTR1|PPIL2|RANGAP1|RHBDD3|SF3A1|SLC25A1|TXN2	1.91870441828e-05	0	1.91870441828e-05		0	1.91870441828e-05	
GSE20152_SPHK1_KO_VS_HTNFA_OVEREXPRESS_ANKLE_DN	9	FOXRED2|HIRA|MIEF1|PACSIN2|TCF20|TNRC6B|TRMU|UBE2L3|XRCC6	0.000475583552195	0	0.000475583552195		0	0.000475583552195	
GSE22033_UNTREATED_VS_ROSIGLITAZONE_TREATED_MEF_UP	10	CLPB|HDHD5|HPS4|MAPK12|MICALL1|MPST|NOL12|PACSIN2|TNRC6B|ZNF74	9.81387921567e-05	0	9.81387921567e-05		0	9.81387921567e-05	
GSE22886_IL2_VS_IL15_STIM_NKCELL_DN	9	APBA1|HIC2|NDUFA6|OR2F1|POLR2F|SNRPD3|TRIOBP|TXNRD2|UFD1	0.000393642344834	0	0.000393642344834		0	0.000393642344834	
GSE32423_MEMORY_VS_NAIVE_CD8_TCELL_IL7_DN	9	CYP27B1|DGCR2|HMGXB4|MTFP1|PHF5A|PIM3|RNF185|RRP7A|RTCB	0.000336806584654	0	0.000336806584654		0	0.000336806584654	
GSE40274_IRF4_VS_FOXP3_AND_IRF4_TRANSDUCED_ACTIVATED_CD4_TCELL_UP	11	CABIN1|CBY1|GTPBP1|JOSD1|L3MBTL2|LZTR1|MAPK1|SNAP29|TFIP11|TOM1|TSPO	4.19928380196e-06	0	4.19928380196e-06		0	4.19928380196e-06	
GSE45365_WT_VS_IFNAR_KO_CD11B_DC_UP	9	ALG12|CABIN1|FAM118A|HPS4|L3MBTL2|NIPSNAP1|PPIL2|TCF20|TRMU	0.000336806584654	0	0.000336806584654		0	0.000336806584654	
GSE45837_WT_VS_GFI1_KO_PDC_DN	10	ADSL|HDHD5|MRPL40|NIPSNAP1|POLR2F|SPECC1L|SUN2|TCF20|UQCR10|XRCC6	7.23931595006e-05	0	7.23931595006e-05		0	7.23931595006e-05	
HAN_SATB1_TARGETS_DN	31	ACO2|ADSL|ALG12|ATXN10|BRD1|CRYBB2|DESI1|MAFF|MAPK11|MCAT|MICALL1|NDUFA6|NUP50|PACSIN2|PLXNB2|PMM1|POLDIP3|RANGAP1|RBX1|RRP7A|SAMM50|SBF1|SLC25A17|ST13|SYNGR1|TCF20|TOB2|TSPO|TST|TTC38|TXNRD2	5.2807658558e-16	0	5.2807658558e-16		0	5.2807658558e-16	
Human Lung_Broet09_58genes (19176396-SuppTable4)	7	GAS2L1|JOSD1|MAPK11|SLC35E4|TANGO2|TMEM184B|TXNRD2	8.63307787155e-08	0	8.63307787155e-08		0	8.63307787155e-08	
Human Lung_Broet09_171genes (19176396-SuppTable3)	8	C22ORF39|CLTCL1|DGCR2|ESS2|HIC2|MRPL40|TMEM191A|UBE2L3	1.09189896551e-05	0	1.09189896551e-05		0	1.09189896551e-05	
Human Lung_Chitale09_103genes (19525976-SuppTable5b)	6	FAHD2A|FOXRED2|LDLR|MAFF|PPIL2|SNRPD3	0.000256771980625	0	0.000256771980625		0	0.000256771980625	
Human Lung_Mikkonen10_98genes (20035825-TableS5b)	6	AP1B1|GUCD1|MICALL1|PLXNB2|SUN2|TXNRD2	0.000295931252309	0	0.000295931252309		0	0.000295931252309	
Human StemCell_Osada05_129genes (15988020-Table1)	7	BIK|GAS2L1|GRAMD4|NPTXR|SEPT5|TOB2|TRIOBP	0.000565823275128	0	0.000565823275128		0	0.000565823275128	
KRIGE_RESPONSE_TO_TOSEDOSTAT_6HR_DN	23	BCR|EWSR1|FOXRED2|GCAT|GRAMD4|HDHD5|L3MBTL2|MCAT|MIF|MTFP1|PES1|POLR2F|POLR3H|PRR5|RANGAP1|RRP7A|SNU13|SYNGR1|TOMM22|TRMU|TTLL12|ZNF74|ZNRF3	0.00017807985383	0	0.00017807985383		0	0.00017807985383	
KRIGE_RESPONSE_TO_TOSEDOSTAT_24HR_DN	26	BCR|CLPB|EWSR1|FAM118A|FOXRED2|GCAT|GRAMD4|HDHD5|L3MBTL2|MCAT|MIF|MTFP1|PARVB|PES1|POLR2F|POLR3H|PRR5|RANGAP1|RRP7A|SNU13|SYNGR1|TOMM22|TRMU|TTLL12|ZNF74|ZNRF3	4.53897005702e-05	0	4.53897005702e-05		0	4.53897005702e-05	
LU_EZH2_TARGETS_UP	14	ACO2|BIK|CBY1|CRYBB2|GUCD1|MAPK11|PDXP|PHF5A|RPS19BP1|TCF20|TOMM22|TRIOBP|UQCR10|ZMAT5	2.57708682571e-06	0	2.57708682571e-06		0	2.57708682571e-06	
MODULE_350	5	ARSA|EWSR1|FAHD2A|RHBDD3|SBF1	0.000480296418199	0	0.000480296418199		0	0.000480296418199	
MOOTHA_HUMAN_MITODB_6_2002	13	ACO2|CYP27B1|GCAT|LMF2|MPST|NDUFA6|SLC25A1|SLC25A17|TOMM22|TSPO|TST|TXN2|TXNRD2	0.000929740726976	0	0.000929740726976		0	0.000929740726976	
MOOTHA_MITOCHONDRIA	15	ACO2|BIK|CYP27B1|LMF2|MB|MCAT|MPST|NDUFA6|SLC25A1|SLC25A17|TOMM22|TSPO|TST|TXN2|TXNRD2	0.000141119507901	0	0.000141119507901		0	0.000141119507901	
MOOTHA_PGC	14	ACO2|ADSL|COMT|EEF1AKMT3|ID2|LRP5L|MRPL40|NDUFA6|PKM|PMM1|POLR2F|RANGAP1|TXN2|UQCR10	0.00029113111651	0	0.00029113111651		0	0.00029113111651	
MYLLYKANGAS_AMPLIFICATION_HOT_SPOT_22	8	BCR|CLTCL1|EP300|EWSR1|MKL1|NF2|PDGFB|SEPT5	4.70090378302e-14	0	4.70090378302e-14		0	4.70090378302e-14	
NIKOLSKY_BREAST_CANCER_22Q13_AMPLICON	10	ALG12|BRD1|MAPK11|MAPK12|PIM3|PLXNB2|SELENOO|TRABD|TUBGCP6|ZBED4	3.51007680291e-17	0	3.51007680291e-17		0	3.51007680291e-17	
STARK_HYPPOCAMPUS_22Q11_DELETION_DN	13	C22ORF39|COMT|DGCR2|DGCR6|ESS2|HIRA|MRPL40|SLC25A1|TANGO2|TRMT2A|TXNRD2|UFD1|ZDHHC8	1.24311880033e-21	0	1.24311880033e-21		0	1.24311880033e-21	
STARK_PREFRONTAL_CORTEX_22Q11_DELETION_DN	19	ATP6V1E1|C22ORF39|COMT|DGCR2|DGCR6|ESS2|HIRA|MRPL40|NIPSNAP1|SLC25A1|SMARCB1|ST13|TANGO2|TRMT2A|TST|TXNRD2|UFD1|UQCR10|ZDHHC8	4.23797538909e-06	0	4.23797538909e-06		0	4.23797538909e-06	
ST_P38_MAPK_PATHWAY	4	MAPK1|MAPK11|MAPK12|TAB1	0.000629234140593	0	0.000629234140593		0	0.000629234140593	
Spliceosome	7	ESS2|PHF5A|SF3A1|SNRPD3|SNU13|TFIP11|ZMAT5	0.000538579452352	0	0.000538579452352		0	0.000538579452352	
U2 snRNP [GoID:GO:0005686; evidenceTypes:IBA|IDA|TAS]	3	PHF5A|SF3A1|SNRPD3	0.000937548535921	0	0.000937548535921		0	0.000937548535921	
WONG_MITOCHONDRIA_GENE_MODULE	10	ATP6V1E1|GCAT|MCAT|MRPL40|NDUFA6|NIPSNAP1|SLC25A1|SLC25A17|TSPO|UQCR10	0.000116062901221	0	0.000116062901221		0	0.000116062901221	
ZHAN_MULTIPLE_MYELOMA_SUBGROUPS	4	ACO2|EWSR1|SNRPD3|XRCC6	0.000385593748021	0	0.000385593748021		0	0.000385593748021	
cellular response to extracellular stimulus [GoID:GO:0031668; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	10	ATF4|COMT|CYP27B1|DEPDC5|GAS2L1|MAPK1|MTMR3|PICK1|SREBF2|TXN2	0.000126016477577	0	0.000126016477577		0	0.000126016477577	
cellular response to nutrient levels [GoID:GO:0031669; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	10	ATF4|COMT|CYP27B1|DEPDC5|GAS2L1|MAPK1|MTMR3|PICK1|SREBF2|TXN2	3.41275740859e-05	0	3.41275740859e-05		0	3.41275740859e-05	
cellular response to starvation [GoID:GO:0009267; evidenceTypes:IBA|IDA|IEA|IEP|IGI|IMP|ISS|TAS]	8	ATF4|COMT|DEPDC5|GAS2L1|MAPK1|MTMR3|PICK1|SREBF2	0.000114093182616	0	0.000114093182616		0	0.000114093182616	
chr22q	3	HPS4|MTFP1|MTMR3	1.52873328785e-05	0	1.52873328785e-05		0	1.52873328785e-05	
chr22q11	48	AIFM3|BCL2L13|BCR|C22ORF39|CABIN1|CLTCL1|COMT|CRKL|CRYBB2|DGCR2|DGCR6|EIF4ENIF1|ESS2|GUCD1|HDHD5|HIC2|HIRA|KIAA1671|KLHL22|LRP5L|LZTR1|MAPK1|MED15|MICAL3|MIF|MRPL40|PEX26|PI4KA|PPIL2|RTL10|SEPT5|SLC2A11|SLC25A1|SMARCB1|SNAP29|SNRPD3|SPECC1L|THAP7|TMEM191A|TOP3B|TRMT2A|TXNRD2|UBE2L3|UFD1|XRCC6|YPEL1|ZDHHC8|ZNF74	1.08961723003e-61	0	1.08961723003e-61		0	1.08961723003e-61	
chr22q12	35	AP1B1|ASCC2|CBY1|CCDC117|DEPDC5|DNAL4|DRG1|EWSR1|FOXRED2|GAS2L1|GCAT|LIMK2|MAFF|MTMR3|NF2|NIPSNAP1|NPTXR|OSBP2|PDGFB|PDXP|PES1|PITPNB|RASL10A|RHBDD3|RNF185|SF3A1|SLC35E4|SUN2|TFIP11|THOC5|TMEM184B|TOB2|TOMM22|TUG1|ZNRF3	9.4539728127e-44	0	9.4539728127e-44		0	9.4539728127e-44	
chr22q13	72	ACO2|ADSL|ALG12|ARHGAP8|ATF4|ATXN10|BIK|BRD1|CCDC134|CDPF1|CHKB|EP300|FAM83F|FAM118A|GRAMD4|GTPBP1|HMGXB4|IFT27|JOSD1|L3MBTL2|LMF2|MAPK11|MAPK12|MB|MCAT|MICALL1|MIEF1|MKL1|MPST|NDUFA6|NOL12|NUP50|ODF3B|PACSIN2|PARVB|PHF5A|PICK1|PIM3|PLXNB2|PMM1|PNPLA3|POLDIP3|POLR2F|POLR3H|PRR5|RANGAP1|RBX1|RPS19BP1|RTL6|SAMM50|SBF1|SGSM3|SLC25A17|SREBF2|ST13|SYNGR1|TAB1|TCF20|TNRC6B|TOM1|TRABD|TRIOBP|TRMU|TSPO|TST|TTC38|TTLL1|TTLL12|TUBGCP6|TXN2|XPNPEP3|ZBED4	8.24605972952e-102	0	8.24605972952e-102		0	8.24605972952e-102	
mitochondrial envelope [GoID:GO:0005740; evidenceTypes:IBA|IC|IDA|IEA|IMP|IPI|ISS|NAS|TAS]	21	AIFM3|BCL2L13|BIK|CHCHD10|CYP27B1|GCAT|GRAMD4|MIEF1|MRPL40|MTFP1|NDUFA6|NIPSNAP1|RNF185|SAMM50|SLC25A1|SLC25A17|SMDT1|TOMM22|TSPO|TST|UQCR10	6.0772169356e-05	0	6.0772169356e-05		0	6.0772169356e-05	
mitochondrial membrane [GoID:GO:0031966; evidenceTypes:IBA|IC|IDA|IEA|IMP|IPI|ISS|NAS|TAS]	20	AIFM3|BCL2L13|BIK|CYP27B1|GCAT|GRAMD4|MIEF1|MRPL40|MTFP1|NDUFA6|NIPSNAP1|RNF185|SAMM50|SLC25A1|SLC25A17|SMDT1|TOMM22|TSPO|TST|UQCR10	8.10076825639e-05	0	8.10076825639e-05		0	8.10076825639e-05	
mitochondrial part [GoID:GO:0044429; evidenceTypes:IBA|IC|IDA|IEA|IMP|IPI|ISS|NAS|TAS]	25	ACO2|AIFM3|BCL2L13|BIK|CHCHD10|CYP27B1|GCAT|GRAMD4|MCAT|MIEF1|MRPL40|MTFP1|NDUFA6|NIPSNAP1|RNF185|SAMM50|SLC25A1|SLC25A17|SMDT1|TOMM22|TSPO|TST|TXN2|TXNRD2|UQCR10	0.000119770572573	0	0.000119770572573		0	0.000119770572573	
mitochondrial transport [GoID:GO:0006839; evidenceTypes:IBA|IC|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	12	HPS4|RTL10|SAMM50|SLC25A1|SLC25A17|SMDT1|SREBF2|TOMM22|TSPO|TST|UBE2L3|ZDHHC8	0.000233579864484	0	0.000233579864484		0	0.000233579864484	
protein targeting [GoID:GO:0006605; evidenceTypes:IBA|IC|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	13	GOLGA7B|HPS4|MICALL1|MIEF1|PEX26|PMM1|SAMM50|SREBF2|SYNGR1|TOMM22|TSPO|UBE2L3|ZDHHC8	0.00026184817119	0	0.00026184817119		0	0.00026184817119	
response to extracellular stimulus [GoID:GO:0009991; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	14	ADSL|ATF4|COMT|CYP27B1|DEPDC5|GAS2L1|LDLR|MAPK1|MTMR3|PICK1|PKM|SREBF2|TSPO|TXN2	0.00049428792681	0	0.00049428792681		0	0.00049428792681	
response to nutrient levels [GoID:GO:0031667; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	14	ADSL|ATF4|COMT|CYP27B1|DEPDC5|GAS2L1|LDLR|MAPK1|MTMR3|PICK1|PKM|SREBF2|TSPO|TXN2	0.000231646094226	0	0.000231646094226		0	0.000231646094226	
response to starvation [GoID:GO:0042594; evidenceTypes:IBA|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	9	ADSL|ATF4|COMT|DEPDC5|GAS2L1|MAPK1|MTMR3|PICK1|SREBF2	0.000103824203362	0	0.000103824203362		0	0.000103824203362	
sulfurtransferase activity [GoID:GO:0016783; evidenceTypes:IBA|IDA|IEA|TAS]	3	MPST|TRMU|TST	0.000316634367288	0	0.000316634367288		0	0.000316634367288	
